| Name | Version | Summary | date |
| pmultiqc |
0.0.38 |
Python package for quality control of proteomics datasets, based on multiqc package |
2025-11-01 06:21:18 |
| alphadia-search-rs |
1.0.0 |
A next-generation search backend for AlphaDIA. |
2025-10-30 14:53:30 |
| alphabase |
1.7.4 |
An infrastructure Python package of the AlphaX ecosystem |
2025-10-30 12:21:05 |
| msreport |
0.0.32 |
Post processing and analysis of quantitative proteomics data |
2025-10-30 08:31:54 |
| find-mfs |
0.2.1 |
A Python package for finding molecular formula candidates from a mass and error window |
2025-10-27 19:07:19 |
| pyXLMS |
1.7.0 |
A python package to process protein cross-linking data. |
2025-10-26 01:25:31 |
| msconvert-cli |
1.0.0 |
Python wrapper for ProteoWizard msconvert with Docker support and preset configs |
2025-10-23 23:19:23 |
| pixelgen-pixelator |
0.22.0 |
A command-line tool and library to process and analyze data generated from technologies from Pixelgen Technologies. |
2025-10-23 12:36:02 |
| ms2rescore |
3.2.0.post1 |
Modular and user-friendly platform for AI-assisted rescoring of peptide identifications. |
2025-10-22 13:24:30 |
| instanexus |
0.1.0 |
End-to-end workflow for de novo protein sequencing based on InstaNovo |
2025-10-16 13:40:20 |
| flippr |
0.2.1 |
FragPipe Limited-Proteolysis Processor (FLiPPR) is modular, fast, and easy-to-use data processing tool for LiP-MS & LFQ-based experiments analyzed in FragPipe |
2025-10-06 16:23:26 |
| simsi-transfer |
0.8.0 |
Software-assisted reduction of missing values in phosphoproteomics and proteomics isobaric labeling data using MS2 spectrum clustering |
2025-09-10 06:44:44 |
| deeplc |
3.1.13 |
DeepLC: Retention time prediction for (modified) peptides using Deep Learning. |
2025-09-01 12:46:26 |
| pyquetmsMS |
0.1.1 |
Memory-efficient mzML to Parquet converter for mass spectrometry files |
2025-09-01 00:19:35 |
| PyquetMS |
0.1.0 |
Memory-efficient mzML to Parquet converter for mass spectrometry files |
2025-08-31 23:51:16 |
| bionext-mcp |
2.2.1 |
🧬 生物信息学MCP服务器 - 专为ModelScope设计的智能生物数据分析工具 |
2025-08-31 07:53:15 |
| alphaquant |
0.2.0 |
An open-source Python package of the AlphaPept ecosystem |
2025-08-22 08:35:28 |
| seer-pas-sdk |
1.0.0 |
SDK for Seer Proteograph Analysis Suite (PAS) |
2025-08-04 17:34:12 |
| ideeplc |
1.1.3 |
iDeepLC: A deep Learning-based retention time predictor for unseen modified peptides with a novel encoding system |
2025-07-18 12:54:21 |
| quantms-utils |
0.0.19 |
Python scripts and helpers for the quantMS workflow |
2025-02-24 19:23:37 |